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galaxyuploader - uploads .bam .sff and .fastq file to a galaxy instance

Published by Torrent Circuit


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Full name


This plugin will uploaded the .bam, .sff and .fastq files from a torrent run to the specified galaxy instance. The following information needs to be provided: Galaxy URL, Galaxy API, Galaxy Library ID, Galaxy Folder ID, IonTorrent URL, IonTorrent username and IonTorrent password. The Galaxy API can be found under the user meun in the Galaxy UI. To find the Galaxy Library ID and Folder ID have your galaxy administrator run the command python {galaxydist}/scripts/api/ [api key] [galaxyurl/api/libraries] and python {galaxydist}/scripts/api/ [api key] [galaxyurl/api/libraries{library id}/contents]


Available versions

The list below is just for information; Zero Install will automatically select one of these versions for you.

0.52012-07-30insecureAnyDownload (5369 bytes)
1.3.12012-07-31insecureAnyDownload (5351 bytes) Download (5351 bytes) Download (5351 bytes)
Required libraries

This feed does not list any additional requirements.